PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.1G100300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 355aa    MW: 37572.8 Da    PI: 5.0921
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.1G100300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.82.3e-23250312163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++
  Sevir.1G100300.1.p 250 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAESLRSENSSLRAELERIRKEYEQLLSQN 312
                         89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.5E-28195IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.8E-20128232No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-16247311No hitNo description
PfamPF001701.7E-21250312IPR004827Basic-leucine zipper domain
SMARTSM003387.2E-21250314IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288252315IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11253310No hitNo description
CDDcd147021.73E-25255305No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGSNEPSTPS KAPKASEQDQ PPATTSGATA SVYPEWPSFQ AYSAMPPHGF FPPTVAANPQ  60
AHPYMWGAQP MVPPYGTPQS PYVMYPPGTV YAHPSTTPGM HPFSHYPMPT NGHAETPGAA  120
PSAPEMNGKS EPGRTSAPSA NGITSHSESG SESESEGSDA NSQNDSHSKD NDGKEDGSSQ  180
NGISYSASQG MLNQSMSMIP IQPGAMVGVP GSTANLNIGM DYWAAPGSAA IPATQGKATA  240
GSARGDQWDE RELKKQKRKQ SNRESARRSR LRKQAECEEL GQRAESLRSE NSSLRAELER  300
IRKEYEQLLS QNASLKEKLG ATGDSIPDMN EQNDGDGSGH QKQPDSDAQP GNES*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1266272RRSRLRK
2266273RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7282600.0KJ728260.1 Zea mays clone pUT6537 bZIP transcription factor (bZIP14) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004952026.10.0PREDICTED: transcription factor HBP-1a-like
SwissprotP239221e-150HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBLK3YTP10.0K3YTP1_SETIT; Uncharacterized protein
STRINGSi017637m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.12e-85basic region/leucine zipper transcription factor 68